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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS17792.1PFAM: Fimbrial assembly family protein; KEGG: pol:Bpro_0782 fimbrial assembly. (206 aa)    
Predicted Functional Partners:
ACS17791.1
TIGRFAM: type IV pilus assembly protein PilM; KEGG: pol:Bpro_0781 type IV pilus assembly protein PilM.
 
 
 0.999
ACS17793.1
PFAM: Pilus assembly protein PilO; KEGG: pol:Bpro_0783 pilus assembly protein, PilO.
 
 
 0.998
ACS17794.1
PFAM: Pilus assembly protein PilP; KEGG: rfr:Rfer_2922 pilus assembly protein, PilQ.
 
 
 0.998
ACS17795.1
TIGRFAM: type IV pilus secretin PilQ; PFAM: type II and III secretion system protein; Secretin/TonB short domain; NolW domain protein; KEGG: rfr:Rfer_2923 type II and III secretion system protein.
 
 
 0.998
ACS21716.1
PFAM: Peptidoglycan-binding LysM; SMART: Peptidoglycan-binding LysM; KEGG: rfr:Rfer_3861 peptidoglycan-binding LysM.
  
 
   0.912
ACS18069.1
KEGG: aav:Aave_1218 putative transmembrane protein.
  
  
 0.835
ACS19476.1
PFAM: type IV pilus assembly PilZ; KEGG: pol:Bpro_2517 type IV pilus assembly PilZ.
  
   
 0.830
ACS19459.1
Protein involved in methylation; KEGG: pol:Bpro_2882 methylation.
 
  
 0.825
ACS19722.1
KEGG: pna:Pnap_2913 type 4 fimbrial biogenesis protein PilY1.
 
  
 0.825
ACS19721.1
KEGG: dac:Daci_5198 fimbrial protein pilin.
 
  
 0.820
Your Current Organism:
Variovorax paradoxus S110
NCBI taxonomy Id: 543728
Other names: V. paradoxus S110, Variovorax paradoxus str. S110, Variovorax paradoxus strain S110
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