close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS17880.1PFAM: inner-membrane translocator; KEGG: dac:Daci_0573 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family. (342 aa)    
Predicted Functional Partners:
ACS17879.1
PFAM: ABC transporter related; inner-membrane translocator; SMART: AAA ATPase; KEGG: dac:Daci_0574 ABC transporter related; Belongs to the binding-protein-dependent transport system permease family.
 
 0.998
ACS17878.1
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: dac:Daci_0575 ABC transporter related.
 
  
 0.952
ACS18157.1
PFAM: ABC transporter related; inner-membrane translocator; SMART: AAA ATPase; KEGG: vei:Veis_2874 ABC transporter related; Belongs to the binding-protein-dependent transport system permease family.
  
 0.943
ACS17881.1
PFAM: Extracellular ligand-binding receptor; KEGG: lch:Lcho_2401 extracellular ligand-binding receptor.
 
  
 0.926
ACS18151.1
PFAM: Extracellular ligand-binding receptor; KEGG: vei:Veis_2672 extracellular ligand-binding receptor.
 
  
 0.849
ACS18152.1
PFAM: Extracellular ligand-binding receptor; KEGG: vei:Veis_2672 extracellular ligand-binding receptor.
 
  
 0.849
ACS18155.1
PFAM: Extracellular ligand-binding receptor; KEGG: vei:Veis_2668 extracellular ligand-binding receptor.
 
  
 0.849
ACS18158.1
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: vei:Veis_2873 ABC transporter related.
 
  
 0.777
ACS17940.1
PFAM: inner-membrane translocator; KEGG: aav:Aave_1876 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
  
 0.760
ACS18741.1
PFAM: inner-membrane translocator; KEGG: aav:Aave_1876 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
  
 0.760
Your Current Organism:
Variovorax paradoxus S110
NCBI taxonomy Id: 543728
Other names: V. paradoxus S110, Variovorax paradoxus str. S110, Variovorax paradoxus strain S110
Server load: medium (44%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.