STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS17888.1TIGRFAM: phenylacetic acid degradation protein PaaD; PFAM: thioesterase superfamily protein; KEGG: mpt:Mpe_A0985 phenylacetic acid degradation protein. (147 aa)    
Predicted Functional Partners:
ACS17883.1
TIGRFAM: phenylacetate-CoA oxygenase, PaaJ subunit; PFAM: protein of unknown function DUF59; KEGG: mpt:Mpe_A0990 putative ring oxidation complex protein 3.
 
 
 0.995
ACS17884.1
TIGRFAM: phenylacetate-CoA oxygenase, PaaI subunit; PFAM: phenylacetic acid catabolic family protein; KEGG: vei:Veis_3947 phenylacetate-CoA oxygenase, PaaI subunit.
 
 
 0.995
ACS17885.1
TIGRFAM: phenylacetate-CoA oxygenase, PaaH subunit; PFAM: phenylacetic acid degradation B; KEGG: dac:Daci_0811 phenylacetate-CoA oxygenase subunit PaaB.
 
 
 0.995
ACS17886.1
TIGRFAM: phenylacetate-CoA oxygenase, PaaG subunit; PFAM: phenylacetic acid catabolic family protein; KEGG: dac:Daci_0810 phenylacetate-CoA oxygenase subunit PaaA.
 
 
 0.995
ACS17887.1
phenylacetate-CoA ligase; Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA).
 
 
 0.995
ACS17882.1
TIGRFAM: phenylacetate-CoA oxygenase/reductase, PaaK subunit; PFAM: ferredoxin; oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; KEGG: dac:Daci_0814 phenylacetate-CoA oxygenase/reductase, PaaK subunit.
 
 
  0.993
ACS21615.1
KEGG: dia:Dtpsy_0455 putative phenylacetate-CoA ligase.
 
 
 0.953
amiE
Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; Catalyzes the hydrolysis of short-chain aliphatic amides to their corresponding organic acids with release of ammonia.
  
 
  0.903
ACS17363.1
PFAM: Amidase; KEGG: pol:Bpro_3826 amidase.
    
  0.900
ACS17478.1
PFAM: Amidase; KEGG: pap:PSPA7_4912 amidase.
    
  0.900
Your Current Organism:
Variovorax paradoxus S110
NCBI taxonomy Id: 543728
Other names: V. paradoxus S110, Variovorax paradoxus str. S110, Variovorax paradoxus strain S110
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.