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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS17892.1PFAM: von Willebrand factor type A; SMART: von Willebrand factor type A; KEGG: pol:Bpro_3893 von Willebrand factor, type A. (345 aa)    
Predicted Functional Partners:
ACS17893.1
PFAM: protein of unknown function DUF58; KEGG: pol:Bpro_3892 protein of unknown function DUF58.
 
  
 0.960
ACS17894.1
Sigma 54 interacting domain protein; PFAM: ATPase associated with various cellular activities AAA_3; ATPase associated with various cellular activities AAA_5; KEGG: pol:Bpro_3891 ATPase associated with various cellular activities, AAA_3.
 
  
 0.868
ACS17895.1
PFAM: peptidase S1 and S6 chymotrypsin/Hap; KEGG: pna:Pnap_3244 peptidase S1 and S6, chymotrypsin/Hap.
 
  
 0.568
ACS19667.1
KEGG: mpt:Mpe_A3277 hypothetical protein.
 
  
 0.559
ACS19994.1
PFAM: ATPase associated with various cellular activities AAA_3; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: pna:Pnap_1219 ATPase.
 
  
 0.518
ACS19666.1
PFAM: ATPase associated with various cellular activities AAA_3; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: mpt:Mpe_A3278 MoxR protein, putative.
 
  
 0.455
ACS17729.1
KEGG: ajs:Ajs_0672 hypothetical protein.
 
     0.414
Your Current Organism:
Variovorax paradoxus S110
NCBI taxonomy Id: 543728
Other names: V. paradoxus S110, Variovorax paradoxus str. S110, Variovorax paradoxus strain S110
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