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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS17906.1PFAM: protein of unknown function DUF6 transmembrane; Protein of unknown function DUF250; KEGG: pna:Pnap_3236 hypothetical protein. (316 aa)    
Predicted Functional Partners:
ACS17905.1
Gamma-glutamyltransferase; PFAM: gamma-glutamyltranspeptidase; KEGG: pol:Bpro_3878 Gamma-glutamyltransferase 2. Threonine peptidase. MEROPS family T03.
       0.756
ACS17907.1
PFAM: short-chain dehydrogenase/reductase SDR; KEGG: pol:Bpro_3876 short-chain dehydrogenase/reductase SDR.
   
   0.700
ACS17904.1
PFAM: conserved hypothetical protein; KEGG: reh:H16_A2779 probable extra-cytoplasmic solute receptor.
       0.683
ACS17903.1
Transcriptional regulator, LysR family; PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bbr:BB3137 LysR family transcriptional regulator.
  
    0.486
Your Current Organism:
Variovorax paradoxus S110
NCBI taxonomy Id: 543728
Other names: V. paradoxus S110, Variovorax paradoxus str. S110, Variovorax paradoxus strain S110
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