close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS17914.1PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: aav:Aave_3456 binding-protein-dependent transport systems inner membrane component. (266 aa)    
Predicted Functional Partners:
ACS17913.1
PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: aav:Aave_3457 ABC transporter-related protein; Belongs to the ABC transporter superfamily.
 
  
 0.966
cpdA
Metallophosphoesterase; Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes.
 
     0.911
ACS16970.1
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rfr:Rfer_0888 binding-protein-dependent transport systems inner membrane component.
 
  
 0.878
ACS17916.1
PFAM: extracellular solute-binding protein family 1; KEGG: aav:Aave_3454 putative periplasmic solute-binding protein.
 
    0.873
ACS17915.1
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: dac:Daci_3123 binding-protein-dependent transport systems inner membrane component.
 
   
0.832
ACS21303.1
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pol:Bpro_2915 binding-protein-dependent transport systems inner membrane component.
 
  
 0.802
ACS20152.1
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: vei:Veis_2471 binding-protein-dependent transport systems inner membrane component.
 
  
 0.756
ACS21302.1
PFAM: extracellular solute-binding protein family 1; KEGG: pol:Bpro_2914 extracellular solute-binding protein, family 1.
 
  
 0.739
ACS17750.1
PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: rde:RD1_1061 Fe-ABC transporter, ATP-binding protein; Belongs to the ABC transporter superfamily.
 
  
 0.722
potA
Spermidine/putrescine ABC transporter ATPase subunit; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system.
 
  
 0.720
Your Current Organism:
Variovorax paradoxus S110
NCBI taxonomy Id: 543728
Other names: V. paradoxus S110, Variovorax paradoxus str. S110, Variovorax paradoxus strain S110
Server load: low (38%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.