close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS17916.1PFAM: extracellular solute-binding protein family 1; KEGG: aav:Aave_3454 putative periplasmic solute-binding protein. (337 aa)    
Predicted Functional Partners:
ACS17915.1
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: dac:Daci_3123 binding-protein-dependent transport systems inner membrane component.
 
     0.883
ACS17914.1
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: aav:Aave_3456 binding-protein-dependent transport systems inner membrane component.
 
    0.873
cpdA
Metallophosphoesterase; Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes.
 
     0.830
ACS17749.1
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rde:RD1_1060 iron ABC transporter, permease protein, putative.
 
  
 0.814
ACS17913.1
PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: aav:Aave_3457 ABC transporter-related protein; Belongs to the ABC transporter superfamily.
 
  
 0.761
ACS17917.1
PFAM: periplasmic binding protein/LacI transcriptional regulator; regulatory protein LacI; SMART: regulatory protein LacI; KEGG: aav:Aave_3453 LacI family transcription regulator.
 
     0.751
ACS20316.1
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bur:Bcep18194_A4317 ABC spermidine/putrescine transporter, inner membrane subunit.
  
  
 0.657
ACS18013.1
PFAM: histidine kinase internal region; KEGG: dia:Dtpsy_2665 histidine kinase internal region.
   
   0.617
ACS17839.1
PFAM: phosphoesterase PA-phosphatase related; KEGG: spe:Spro_1575 phosphoesterase PA-phosphatase related.
  
     0.506
ACS20500.1
PFAM: major facilitator superfamily MFS_1; KEGG: aav:Aave_4589 major facilitator superfamily transporter.
 
  
 0.496
Your Current Organism:
Variovorax paradoxus S110
NCBI taxonomy Id: 543728
Other names: V. paradoxus S110, Variovorax paradoxus str. S110, Variovorax paradoxus strain S110
Server load: medium (42%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.