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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS17946.1KEGG: met:M446_1288 hypothetical protein. (208 aa)    
Predicted Functional Partners:
ACS17945.1
PFAM: NAD-dependent epimerase/dehydratase; KEGG: aav:Aave_1978 NAD-dependent epimerase/dehydratase.
       0.773
ACS17944.1
PFAM: oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; ferredoxin; KEGG: aav:Aave_1977 CDP-6-deoxy-delta-3,4-glucoseen reductase.
       0.559
ACS17943.1
PFAM: conserved hypothetical protein; KEGG: rfr:Rfer_3300 hypothetical protein.
       0.480
ACS17947.1
TIGRFAM: cysteine synthase B; cysteine synthase; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; KEGG: pol:Bpro_3726 cysteine synthase B; Belongs to the cysteine synthase/cystathionine beta- synthase family.
       0.472
ACS17948.1
PFAM: NUDIX hydrolase; KEGG: vei:Veis_1027 NUDIX hydrolase.
       0.469
ACS17949.1
PFAM: SirA family protein; KEGG: dia:Dtpsy_2384 SirA family protein; Belongs to the sulfur carrier protein TusA family.
       0.469
Your Current Organism:
Variovorax paradoxus S110
NCBI taxonomy Id: 543728
Other names: V. paradoxus S110, Variovorax paradoxus str. S110, Variovorax paradoxus strain S110
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