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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS17947.1TIGRFAM: cysteine synthase B; cysteine synthase; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; KEGG: pol:Bpro_3726 cysteine synthase B; Belongs to the cysteine synthase/cystathionine beta- synthase family. (300 aa)    
Predicted Functional Partners:
ACS20181.1
TIGRFAM: serine O-acetyltransferase; KEGG: aav:Aave_2076 serine O-acetyltransferase.
 
 0.986
ACS18540.1
Serine O-acetyltransferase; PFAM: transferase hexapeptide repeat containing protein; KEGG: pna:Pnap_0539 serine O-acetyltransferase.
 
 0.983
ACS19590.1
Serine O-acetyltransferase; PFAM: transferase hexapeptide repeat containing protein; KEGG: pna:Pnap_0539 serine O-acetyltransferase.
 
 0.983
ACS17949.1
PFAM: SirA family protein; KEGG: dia:Dtpsy_2384 SirA family protein; Belongs to the sulfur carrier protein TusA family.
  
  
 0.881
ACS17948.1
PFAM: NUDIX hydrolase; KEGG: vei:Veis_1027 NUDIX hydrolase.
       0.858
ACS19032.1
PFAM: phosphoadenosine phosphosulfate reductase; KEGG: dac:Daci_4655 sulfate adenylyltransferase subunit 2.
  
  
 0.756
metZ
O-succinylhomoserine sulfhydrylase; Catalyzes the formation of L-homocysteine from O-succinyl-L- homoserine (OSHS) and hydrogen sulfide.
 
 
 0.737
cysS
KEGG: ajs:Ajs_1623 cysteinyl-tRNA synthetase; TIGRFAM: cysteinyl-tRNA synthetase; PFAM: Cysteinyl-tRNA synthetase class Ia; Cysteinyl-tRNA synthetase class Ia DALR; tRNA synthetase class I (M); Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 
 0.718
ACS18838.1
TIGRFAM: cystathionine beta-lyase; PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; KEGG: dia:Dtpsy_1601 Cys/Met metabolism pyridoxal-phosphate-dependent protein.
 
 
 0.696
ACS18534.1
KEGG: dac:Daci_5774 cystathionine beta-lyase; TIGRFAM: cystathionine beta-lyase; PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein.
 
 
 0.693
Your Current Organism:
Variovorax paradoxus S110
NCBI taxonomy Id: 543728
Other names: V. paradoxus S110, Variovorax paradoxus str. S110, Variovorax paradoxus strain S110
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