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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS17979.1PFAM: protein of unknown function DUF1089; KEGG: rsh:Rsph17029_3663 hypothetical protein. (187 aa)    
Predicted Functional Partners:
ACS17980.1
KEGG: dac:Daci_1894 hypothetical protein.
       0.773
ACS17978.1
KEGG: azc:AZC_4022 hypothetical protein.
       0.546
ACS17977.1
PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: azc:AZC_4023 TRAP-type mannitol/chloroaromatic compound transport permease.
       0.543
ACS21916.1
Putative membrane protein involved in toxin uptake; KEGG: dac:Daci_2082 hypothetical protein.
  
     0.520
ACS21072.1
KEGG: dac:Daci_2082 hypothetical protein.
  
     0.494
ACS21618.1
Hypothetical protein; KEGG: bmj:BMULJ_02752 glucoamylase.
  
     0.403
ACS17217.1
Hypothetical protein; KEGG: eba:ebA1686 serine/threonine protein kinase.
  
     0.400
Your Current Organism:
Variovorax paradoxus S110
NCBI taxonomy Id: 543728
Other names: V. paradoxus S110, Variovorax paradoxus str. S110, Variovorax paradoxus strain S110
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