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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS17999.1PFAM: GCN5-related N-acetyltransferase; KEGG: rfr:Rfer_3143 GCN5-related N-acetyltransferase. (141 aa)    
Predicted Functional Partners:
ACS17998.1
PFAM: GCN5-related N-acetyltransferase; KEGG: rec:RHECIAT_CH0002805 putative acetyltransferase protein.
     
 0.788
ACS17997.1
KEGG: bbt:BBta_6235 hypothetical protein.
       0.675
ACS18000.1
TIGRFAM: tRNA 2-selenouridine synthase; SMART: Rhodanese domain protein; KEGG: ajs:Ajs_3480 tRNA 2-selenouridine synthase; Belongs to the SelU family.
       0.668
ACS22320.1
PFAM: GCN5-related N-acetyltransferase; KEGG: pfl:PFL_5013 acetyltransferase.
  
     0.657
ACS17996.1
PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: ara:Arad_4739 amino acid efflux protein.
       0.600
ACS18001.1
Hypothetical protein; KEGG: rpe:RPE_2275 peptidase C14, caspase catalytic subunit P20.
       0.473
ACS18002.1
PFAM: ribonuclease H; KEGG: pol:Bpro_4830 ribonuclease H.
       0.456
ACS18875.1
KEGG: hch:HCH_01177 hypothetical protein.
 
     0.421
Your Current Organism:
Variovorax paradoxus S110
NCBI taxonomy Id: 543728
Other names: V. paradoxus S110, Variovorax paradoxus str. S110, Variovorax paradoxus strain S110
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