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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS18059.1PFAM: protein of unknown function DUF45; KEGG: azo:azo0661 hypothetical protein. (177 aa)    
Predicted Functional Partners:
ACS18060.1
KEGG: dac:Daci_1060 molecular chaperone, HSP70 class.
 
     0.817
lysS
TIGRFAM: lysyl-tRNA synthetase; PFAM: tRNA synthetase class II (D K and N); nucleic acid binding OB-fold tRNA/helicase-type; KEGG: aav:Aave_1204 lysyl-tRNA synthetase; Belongs to the class-II aminoacyl-tRNA synthetase family.
  
    0.797
ACS20268.1
KEGG: pol:Bpro_3456 hypothetical protein.
 
     0.592
ACS21772.1
PFAM: YaeQ family protein; KEGG: rfr:Rfer_4048 YaeQ.
 
    0.546
ACS18062.1
PFAM: peptidase S16 lon domain protein; SMART: peptidase S16 lon domain protein; KEGG: pol:Bpro_3619 peptidase S16, lon-like.
       0.500
ACS21138.1
PFAM: restriction endonuclease; DNA topoisomerase type IA zn finger domain protein; KEGG: aav:Aave_1379 restriction endonuclease.
 
     0.480
ACS20690.1
PFAM: protein of unknown function DUF480; KEGG: dar:Daro_2469 hypothetical protein; Belongs to the UPF0502 family.
  
     0.445
ACS18682.1
PFAM: protein of unknown function RIO1; SMART: protein of unknown function RIO1; KEGG: pna:Pnap_0163 protein of unknown function RIO1.
  
     0.426
ACS18861.1
PFAM: protein of unknown function DUF1294; KEGG: pna:Pnap_1898 hypothetical protein.
 
    0.419
ppnP
Protein of unknown function DUF1255; Catalyzes the phosphorolysis of diverse nucleosides, yielding D-ribose 1-phosphate and the respective free bases. Can use uridine, adenosine, guanosine, cytidine, thymidine, inosine and xanthosine as substrates. Also catalyzes the reverse reactions.
  
     0.405
Your Current Organism:
Variovorax paradoxus S110
NCBI taxonomy Id: 543728
Other names: V. paradoxus S110, Variovorax paradoxus str. S110, Variovorax paradoxus strain S110
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