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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS18104.1KEGG: dac:Daci_2180 hypothetical protein. (106 aa)    
Predicted Functional Partners:
ACS21073.1
PFAM: Domain of unknown function DUF1841; KEGG: aav:Aave_3950 hypothetical protein.
  
     0.742
ACS17089.1
TIGRFAM: glutamate/cysteine ligase; PFAM: glutamate--cysteine ligase GshA; KEGG: dia:Dtpsy_3259 glutamate/cysteine ligase.
  
     0.736
ACS18319.1
KEGG: pna:Pnap_2770 membrane protein-like protein.
  
     0.692
ACS18080.1
TIGRFAM: succinate dehydrogenase, hydrophobic membrane anchor protein; KEGG: pol:Bpro_3601 succinate dehydrogenase subunit D.
  
     0.657
ACS20113.1
KEGG: pol:Bpro_3242 putative transmembrane protein.
  
     0.648
ACS18416.1
TIGRFAM: phasin family protein; KEGG: dia:Dtpsy_1366 phasin family protein.
  
     0.621
ACS18102.1
Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline.
       0.600
ACS18081.1
TIGRFAM: succinate dehydrogenase, cytochrome b556 subunit; PFAM: succinate dehydrogenase cytochrome b subunit; KEGG: ajs:Ajs_2793 succinate dehydrogenase subunit C.
  
     0.591
ACS18219.1
PFAM: Rieske [2Fe-2S] domain protein; KEGG: rfr:Rfer_2878 Rieske (2Fe-2S) protein.
  
     0.586
ACS21005.1
KEGG: aav:Aave_3908 biotin synthesis protein BioC.
  
     0.584
Your Current Organism:
Variovorax paradoxus S110
NCBI taxonomy Id: 543728
Other names: V. paradoxus S110, Variovorax paradoxus str. S110, Variovorax paradoxus strain S110
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