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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS18122.1KEGG: rfr:Rfer_1400 hypothetical protein. (148 aa)    
Predicted Functional Partners:
ACS18123.1
PFAM: GCN5-related N-acetyltransferase; KEGG: dia:Dtpsy_2704 GCN5-related N-acetyltransferase.
       0.803
ACS21390.1
KEGG: dia:Dtpsy_0437 hypothetical protein.
  
     0.764
ACS21774.1
PFAM: protein of unknown function DUF1289; KEGG: pol:Bpro_4664 protein of unknown function DUF1289.
  
     0.758
ACS21369.1
PFAM: GCN5-related N-acetyltransferase; KEGG: pol:Bpro_4211 GCN5-related N-acetyltransferase.
 
     0.757
ACS21874.1
PFAM: Barstar (barnase inhibitor); KEGG: dia:Dtpsy_3467 barstar (barnase inhibitor).
  
     0.751
ACS21711.1
PFAM: branched-chain amino acid transport; KEGG: pol:Bpro_4636 branched-chain amino acid transport.
  
     0.749
ACS18993.1
KEGG: dia:Dtpsy_1955 putative transmembrane protein.
  
     0.735
ACS17727.1
PFAM: General secretion pathway L; KEGG: pol:Bpro_1326 hypothetical protein.
  
     0.714
ACS21004.1
KEGG: pol:Bpro_1244 putative transmembrane protein.
  
     0.709
ACS18281.1
KEGG: ajs:Ajs_1187 putative transmembrane protein.
  
     0.691
Your Current Organism:
Variovorax paradoxus S110
NCBI taxonomy Id: 543728
Other names: V. paradoxus S110, Variovorax paradoxus str. S110, Variovorax paradoxus strain S110
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