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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS18148.1PFAM: protein of unknown function DUF35; short-chain dehydrogenase/reductase SDR; KEGG: vei:Veis_2675 hypothetical protein. (417 aa)    
Predicted Functional Partners:
ACS18147.1
KEGG: vei:Veis_2676 hypothetical protein.
 
 
 0.988
ACS18145.1
PFAM: aromatic-ring-hydroxylating dioxygenase beta subunit; KEGG: vei:Veis_2678 aromatic-ring-hydroxylating dioxygenase, beta subunit.
 
  
 0.954
ACS18144.1
PFAM: Rieske [2Fe-2S] domain protein; Aromatic-ring-hydroxylating dioxygenase, alpha subunit-like; KEGG: vei:Veis_2679 Rieske (2Fe-2S) domain-containing protein.
 
  
 0.949
ACS18146.1
PFAM: AMP-dependent synthetase and ligase; KEGG: vei:Veis_2677 AMP-dependent synthetase and ligase.
 
 
 0.942
ACS18149.1
PFAM: cyclase family protein; KEGG: vei:Veis_2674 cyclase family protein.
 
    0.939
ACS18142.1
KEGG: rso:RSc1828 putative indolepyruvate oxidoreductase subunit B.
 
   
 0.912
ACS18141.1
Indolepyruvate ferredoxin oxidoreductase; PFAM: thiamine pyrophosphate protein domain protein TPP-binding; KEGG: rso:RSc1829 putative indolepyruvate ferredoxin alpha subunit oxidoreductase protein.
 
   
 0.903
ACS22261.1
PFAM: Thiolase; KEGG: lch:Lcho_2370 propanoyl-CoA C-acyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
 
 
 0.841
ACS18143.1
PFAM: ferredoxin; Oxidoreductase FAD-binding domain protein; oxidoreductase FAD/NAD(P)-binding domain protein; KEGG: vei:Veis_2680 ferredoxin.
 
 
 0.835
ACS18154.1
PFAM: aromatic-ring-hydroxylating dioxygenase beta subunit; KEGG: vei:Veis_2669 aromatic-ring-hydroxylating dioxygenase, beta subunit.
 
  
 0.834
Your Current Organism:
Variovorax paradoxus S110
NCBI taxonomy Id: 543728
Other names: V. paradoxus S110, Variovorax paradoxus str. S110, Variovorax paradoxus strain S110
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