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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS18186.1Azurin; Transfers electrons from cytochrome c551 to cytochrome oxidase. (153 aa)    
Predicted Functional Partners:
ACS17031.1
PFAM: Ricin B lectin; PKD domain containing protein; SMART: Ricin B lectin; PKD domain containing protein; KEGG: scl:sce8906 hypothetical protein.
  
 
 0.737
ACS16992.1
PFAM: SMP-30/Gluconolaconase/LRE domain protein; KEGG: rpa:RPA4432 NHL repeat-containing protein.
    
 
 0.596
ACS18278.1
TIGRFAM: 40-residue YVTN family beta-propeller repeat protein; KEGG: pol:Bpro_1802 hypothetical protein.
    
 
 0.596
ACS19657.1
TIGRFAM: 40-residue YVTN family beta-propeller repeat protein; KEGG: lch:Lcho_3851 YVTN beta-propeller repeat-containing protein.
    
 
 0.596
ACS19664.1
TIGRFAM: 40-residue YVTN family beta-propeller repeat protein; PFAM: NHL repeat containing protein; KEGG: mpt:Mpe_A3013 hypothetical protein.
    
 
 0.596
ACS20263.1
KEGG: met:M446_5908 hypothetical protein.
    
 
 0.596
ACS20618.1
TIGRFAM: 40-residue YVTN family beta-propeller repeat protein; PFAM: blue (type 1) copper domain protein; KEGG: bja:bll4706 hypothetical protein.
    
 
 0.596
ACS18187.1
PFAM: UvrD/REP helicase; KEGG: pol:Bpro_1723 ATP-dependent DNA helicase UvrD.
       0.588
ACS17640.1
PFAM: OmpW family protein; KEGG: har:HEAR0019 outer membrane protein W.
   
  
 0.537
ACS19424.1
PFAM: CheB methylesterase; KEGG: pna:Pnap_1071 CheB methylesterase.
   
    0.537
Your Current Organism:
Variovorax paradoxus S110
NCBI taxonomy Id: 543728
Other names: V. paradoxus S110, Variovorax paradoxus str. S110, Variovorax paradoxus strain S110
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