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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS18196.1D-amino-acid dehydrogenase; PFAM: FAD dependent oxidoreductase; KEGG: vei:Veis_4738 D-amino-acid dehydrogenase. (406 aa)    
Predicted Functional Partners:
ACS19938.1
4-hydroxyphenylpyruvate dioxygenase; PFAM: Xylose isomerase domain protein TIM barrel; KEGG: pst:PSPTO_2346 4-hydroxyphenylpyruvate dioxygenase, putative.
   
 
 0.910
ACS21371.1
KEGG: aav:Aave_4191 4-hydroxyphenylpyruvate dioxygenase; TIGRFAM: 4-hydroxyphenylpyruvate dioxygenase; PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase.
   
 
 0.908
ACS18774.1
PFAM: aminotransferase class I and II; KEGG: pna:Pnap_1562 aromatic amino acid aminotransferase.
     
 0.904
ACS17435.1
PFAM: Malate/L-lactate dehydrogenase; KEGG: vei:Veis_1530 hypothetical protein; Belongs to the LDH2/MDH2 oxidoreductase family.
    
 0.901
ACS16975.1
PFAM: aminotransferase class I and II; KEGG: rfr:Rfer_0881 aminotransferase, class I and II.
    
 0.662
ACS22389.1
PFAM: aminotransferase class I and II; KEGG: vei:Veis_2902 aminotransferase, class I and II.
    
 0.662
ACS22920.1
PFAM: aminotransferase class I and II; aminotransferase class V; KEGG: rso:RSp0943 aspartate aminotransferase.
    
 0.662
hisC
TIGRFAM: histidinol-phosphate aminotransferase; PFAM: aminotransferase class I and II; KEGG: pna:Pnap_0697 histidinol-phosphate aminotransferase; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily.
   
 
 0.661
hisC-2
TIGRFAM: histidinol-phosphate aminotransferase; PFAM: aminotransferase class I and II; KEGG: rfr:Rfer_1408 histidinol-phosphate aminotransferase; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily.
   
 
 0.661
ACS19182.1
PFAM: aminotransferase class I and II; KEGG: pna:Pnap_2147 aminotransferase, class I and II.
   
 
 0.661
Your Current Organism:
Variovorax paradoxus S110
NCBI taxonomy Id: 543728
Other names: V. paradoxus S110, Variovorax paradoxus str. S110, Variovorax paradoxus strain S110
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