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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS18230.1Transcriptional regulator, LysR family; PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: ajs:Ajs_4102 LysR family transcriptional regulator. (315 aa)    
Predicted Functional Partners:
ACS18229.1
Beta-alanine--pyruvate transaminase; PFAM: aminotransferase class-III; KEGG: pol:Bpro_4286 beta alanine--pyruvate transaminase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
 
     0.844
ACS18365.1
KEGG: pol:Bpro_3120 putative transcriptional regulator.
  
    0.462
ACS18195.1
Transcriptional regulator, LysR family; PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: pol:Bpro_1998 transcriptional regulator, LysR family.
  
     0.454
ACS21303.1
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pol:Bpro_2915 binding-protein-dependent transport systems inner membrane component.
  
    0.449
ACS21302.1
PFAM: extracellular solute-binding protein family 1; KEGG: pol:Bpro_2914 extracellular solute-binding protein, family 1.
  
     0.422
ACS18228.1
Transcriptional regulator of molybdate metabolism, LysR family; PFAM: regulatory protein LysR; KEGG: bbr:BB2126 hypothetical protein.
       0.420
ACS21354.1
PFAM: Tetracycline transcriptional regulator YcdC domain protein; regulatory protein TetR; KEGG: oan:Oant_3875 transcriptional regulator, TetR family.
  
 
   0.418
ACS19876.1
Transcriptional regulator, LysR family; PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: dia:Dtpsy_1814 transcriptional regulator, LysR family.
  
     0.407
Your Current Organism:
Variovorax paradoxus S110
NCBI taxonomy Id: 543728
Other names: V. paradoxus S110, Variovorax paradoxus str. S110, Variovorax paradoxus strain S110
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