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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS18243.1Transcriptional regulator, Fis family; PFAM: helix-turn-helix Fis-type; GAF domain protein; KEGG: pol:Bpro_1769 putative transcriptional regulator, fis family. (399 aa)    
Predicted Functional Partners:
ACS18244.1
PFAM: [2Fe-2S]-binding domain protein; ferredoxin; KEGG: pol:Bpro_0578 (2Fe-2S)-binding.
       0.552
ACS18245.1
PFAM: aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; aldehyde oxidase and xanthine dehydrogenase a/b hammerhead; KEGG: dac:Daci_2249 aldehyde oxidase and xanthine dehydrogenase molybdopterin binding.
  
    0.528
ACS19041.1
Sigma54 specific transcriptional regulator, Fis family; PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: dac:Daci_2530 putative sigma54 specific transcriptional regulator.
 
   
 0.490
ACS18246.1
PFAM: molybdopterin dehydrogenase FAD-binding; KEGG: pol:Bpro_0576 molybdopterin dehydrogenase, FAD-binding.
       0.465
ACS17727.1
PFAM: General secretion pathway L; KEGG: pol:Bpro_1326 hypothetical protein.
  
     0.440
ACS17799.1
PFAM: major facilitator superfamily MFS_1; KEGG: dac:Daci_3974 major facilitator transporter.
  
     0.422
ACS20596.1
PFAM: carbon starvation protein CstA; KEGG: aav:Aave_4228 carbon starvation protein CstA.
  
    0.417
ACS20226.1
KEGG: mmw:Mmwyl1_4380 hypothetical protein.
  
     0.404
Your Current Organism:
Variovorax paradoxus S110
NCBI taxonomy Id: 543728
Other names: V. paradoxus S110, Variovorax paradoxus str. S110, Variovorax paradoxus strain S110
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