close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
crcBCrcB protein; Important for reducing fluoride concentration in the cell, thus reducing its toxicity; Belongs to the CrcB (TC 9.B.71) family. (125 aa)    
Predicted Functional Partners:
ACS18259.1
PFAM: Tripartite ATP-independent periplasmic transporter DctQ component; KEGG: dia:Dtpsy_1376 tripartite ATP-independent periplasmic transporter DctQ component.
 
   
 0.733
ACS18258.1
TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: dia:Dtpsy_1375 TRAP dicarboxylate transporter, DctM subunit.
       0.685
ACS18256.1
NADH dehydrogenase (quinone); PFAM: NADH/Ubiquinone/plastoquinone (complex I); Na+/H+ antiporter MnhB subunit-related protein; NADH-Ubiquinone oxidoreductase (complex I) chain 5/L domain protein; KEGG: aav:Aave_3289 putative monovalent cation/H+ antiporter subunit A.
  
  
 0.645
ACS18260.1
PFAM: TRAP dicarboxylate transporter- DctP subunit; KEGG: dia:Dtpsy_1377 TRAP dicarboxylate transporter-DctP subunit.
       0.643
ACS18253.1
KEGG: pna:Pnap_1521 putative monovalent cation/H+ antiporter subunit E.
     
 0.629
ACS18254.1
PFAM: NADH/Ubiquinone/plastoquinone (complex I); KEGG: dia:Dtpsy_1384 NADH/ubiquinone/plastoquinone (complex I).
     
 0.629
ACS18251.1
TIGRFAM: monovalent cation/proton antiporter, MnhG/PhaG subunit; PFAM: Na+/H+ antiporter subunit; KEGG: aav:Aave_3294 Na+/H+ antiporter subunit.
       0.627
ACS18252.1
PFAM: multiple resistance and pH regulation protein F; KEGG: pna:Pnap_1520 multiple resistance and pH regulation protein F.
       0.627
ACS18255.1
PFAM: NADH-ubiquinone oxidoreductase chain 4L; KEGG: dia:Dtpsy_1385 NADH-ubiquinone oxidoreductase chain 4L.
       0.597
ACS18733.1
PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: vei:Veis_1884 acyl-CoA dehydrogenase domain-containing protein.
   
    0.508
Your Current Organism:
Variovorax paradoxus S110
NCBI taxonomy Id: 543728
Other names: V. paradoxus S110, Variovorax paradoxus str. S110, Variovorax paradoxus strain S110
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.