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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS18280.1PFAM: fatty acid hydroxylase; KEGG: aav:Aave_1439 hypothetical protein. (324 aa)    
Predicted Functional Partners:
ACS18279.1
PFAM: polysaccharide deacetylase; KEGG: aav:Aave_1438 polysaccharide deacetylase.
 
     0.947
ACS18278.1
TIGRFAM: 40-residue YVTN family beta-propeller repeat protein; KEGG: pol:Bpro_1802 hypothetical protein.
 
     0.946
ACS18281.1
KEGG: ajs:Ajs_1187 putative transmembrane protein.
 
     0.778
ACS18282.1
PFAM: molybdopterin binding domain; KEGG: pol:Bpro_1806 molybdopterin binding domain.
       0.707
ACS18277.1
PFAM: pseudouridine synthase; RNA-binding S4 domain protein; KEGG: pna:Pnap_2786 pseudouridine synthase; Belongs to the pseudouridine synthase RsuA family.
       0.601
ACS17729.1
KEGG: ajs:Ajs_0672 hypothetical protein.
  
     0.543
ACS17725.1
KEGG: dia:Dtpsy_0647 putative general secretory pathway N transmembrane protein.
  
     0.534
ACS18283.1
TIGRFAM: glutamine synthetase, type I; PFAM: glutamine synthetase catalytic region; glutamine synthetase beta-Grasp; KEGG: mpt:Mpe_A2076 L-glutamine synthetase.
     
 0.509
ACS21466.1
PFAM: phosphoesterase PA-phosphatase related; SMART: phosphoesterase PA-phosphatase related; KEGG: mpt:Mpe_A2021 hypothetical protein.
  
 
 0.477
ACS17728.1
KEGG: pol:Bpro_1325 general secretion pathway protein K.
  
     0.469
Your Current Organism:
Variovorax paradoxus S110
NCBI taxonomy Id: 543728
Other names: V. paradoxus S110, Variovorax paradoxus str. S110, Variovorax paradoxus strain S110
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