close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS18299.1PFAM: FAD dependent oxidoreductase; KEGG: bam:Bamb_6361 FAD dependent oxidoreductase. (441 aa)    
Predicted Functional Partners:
ACS16967.1
PFAM: BFD domain protein [2Fe-2S]-binding domain protein; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: rfr:Rfer_0885 BFD-like (2Fe-2S)-binding protein.
 
 
 0.786
ACS22224.1
TIGRFAM: haloacid dehalogenase, type II; HAD-superfamily hydrolase, subfamily IA, variant 2 (HAD-like); HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: aav:Aave_2185 haloacid dehalogenase, type II.
 
  
 0.782
ACS22223.1
PFAM: GCN5-related N-acetyltransferase; KEGG: aav:Aave_2184 GCN5-related N-acetyltransferase.
 
     0.766
ACS22226.1
PFAM: extracellular solute-binding protein family 5; KEGG: aav:Aave_2187 extracellular solute-binding protein.
  
     0.762
ACS22200.1
TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 2 (HAD-like); PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: aav:Aave_2178 HAD family hydrolase.
 
  
 0.758
ACS18300.1
PFAM: protein of unknown function DUF861 cupin_3; KEGG: bpy:Bphyt_5906 protein of unknown function DUF861 cupin_3.
  
    0.736
ACS19917.1
TIGRFAM: glycine cleavage system T protein; PFAM: glycine cleavage T protein (aminomethyl transferase); Glycine cleavage T-protein barrel; KEGG: dia:Dtpsy_1741 glycine cleavage system T protein.
 
 0.714
ACS18301.1
PFAM: Aldehyde Dehydrogenase; KEGG: aav:Aave_2805 aldehyde dehydrogenase.
 
  
 0.661
ACS22228.1
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: aav:Aave_2189 binding-protein-dependent transport systems inner membrane component.
  
    0.634
ACS22229.1
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: aav:Aave_2190 ABC transporter-related protein.
  
  
 0.626
Your Current Organism:
Variovorax paradoxus S110
NCBI taxonomy Id: 543728
Other names: V. paradoxus S110, Variovorax paradoxus str. S110, Variovorax paradoxus strain S110
Server load: low (34%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.