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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS18309.1KEGG: mpt:Mpe_A0046 hypothetical protein. (337 aa)    
Predicted Functional Partners:
ACS18308.1
Histidine kinase; PFAM: ATP-binding region ATPase domain protein; response regulator receiver; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; response regulator receiver; histidine kinase A domain protein; KEGG: bph:Bphy_5975 histidine kinase.
  
  
 0.791
ACS18310.1
TIGRFAM: DNA ligase D; DNA polymerase LigD, ligase domain protein; DNA polymerase LigD, polymerase domain protein; DNA ligase D, 3'-phosphoesterase domain protein; PFAM: ATP dependent DNA ligase; DNA primase small subunit; ATP dependent DNA ligase domain protein; KEGG: nmu:Nmul_A1177 ATP-dependent DNA ligase.
       0.790
ACS18307.1
Putative circadian clock protein, KaiC; KEGG: psa:PST_2885 circadian oscillation regulator; PFAM: KaiA binding; Circadian clock protein KaiC central region; SMART: AAA ATPase.
     
 0.782
ACS16676.1
PFAM: Endonuclease/exonuclease/phosphatase; KEGG: mpt:Mpe_A0048 hypothetical protein.
 
  
 0.751
clsB
Phospholipase D/Transphosphatidylase; Catalyzes the phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol.
 
  
 0.628
clsB-2
Phospholipase D/Transphosphatidylase; Catalyzes the phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol.
 
  
 0.615
ACS17149.1
KEGG: psp:PSPPH_2654 putative lipoprotein.
  
     0.569
ACS17427.1
PFAM: glycosyl transferase family 2; Methyltransferase type 11; glycosyl transferase group 1; KEGG: gbe:GbCGDNIH1_0743 glycosyltransferase.
  
  
 0.562
ACS20874.1
PFAM: AsmA family protein; KEGG: mms:mma_3643 AsmA protein.
 
     0.559
ACS20733.1
PFAM: Endonuclease/exonuclease/phosphatase; KEGG: aav:Aave_3633 endonuclease/exonuclease/phosphatase.
 
  
 0.505
Your Current Organism:
Variovorax paradoxus S110
NCBI taxonomy Id: 543728
Other names: V. paradoxus S110, Variovorax paradoxus str. S110, Variovorax paradoxus strain S110
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