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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS18329.1PFAM: CBS domain containing protein; SMART: CBS domain containing protein; KEGG: aav:Aave_2996 XRE family transcriptional regulator. (146 aa)    
Predicted Functional Partners:
ACS17360.1
PFAM: CBS domain containing protein; SMART: CBS domain containing protein; KEGG: dia:Dtpsy_1821 CBS domain containing protein.
  
   
 0.736
ACS22071.1
Putative signal transduction protein with CBS domains; PFAM: CBS domain containing protein; SMART: CBS domain containing protein; KEGG: rfr:Rfer_2797 signal-transduction protein.
  
   
 0.735
ACS18647.1
Putative signal transduction protein with CBS domains; PFAM: CBS domain containing protein; SMART: CBS domain containing protein; KEGG: dia:Dtpsy_1821 CBS domain containing protein.
  
   
 0.719
ACS22892.1
PFAM: CBS domain containing protein; SMART: CBS domain containing protein; KEGG: mms:mma_1652 inosine-5'-monophosphate dehydrogenase.
 
   
 0.710
ACS18328.1
O-acetylhomoserine/O-acetylserine sulfhydrylase; KEGG: pol:Bpro_1836 O-acetylhomoserine aminocarboxypropyltransferase; TIGRFAM: O-acetylhomoserine/O-acetylserine sulfhydrylase; PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein.
     
 0.587
ACS18327.1
PFAM: alpha/beta hydrolase fold; PGAP1 family protein; KEGG: pol:Bpro_1835 alpha/beta hydrolase fold.
       0.424
Your Current Organism:
Variovorax paradoxus S110
NCBI taxonomy Id: 543728
Other names: V. paradoxus S110, Variovorax paradoxus str. S110, Variovorax paradoxus strain S110
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