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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS18340.1PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: mca:MCA0083 UbiE/COQ5 family methlytransferase. (319 aa)    
Predicted Functional Partners:
ACS18339.1
KEGG: aba:Acid345_1846 hypothetical protein.
 
     0.842
ACS18341.1
PFAM: putative thiol-disulphide oxidoreductase DCC; KEGG: aav:Aave_1941 putative thiol-disulphide oxidoreductase DCC.
 
     0.808
ACS16920.1
PFAM: O-antigen polymerase; KEGG: har:HEAR0457 hypothetical protein.
 
     0.764
ACS21916.1
Putative membrane protein involved in toxin uptake; KEGG: dac:Daci_2082 hypothetical protein.
  
     0.753
ACS21072.1
KEGG: dac:Daci_2082 hypothetical protein.
  
     0.752
ACS16835.1
KEGG: cja:CJA_0124 hypothetical protein.
 
     0.749
ACS21383.1
KEGG: sbn:Sbal195_2514 hypothetical protein.
  
     0.746
ACS21618.1
Hypothetical protein; KEGG: bmj:BMULJ_02752 glucoamylase.
 
     0.737
ACS20247.1
KEGG: xac:XAC4267 hypothetical protein.
  
     0.722
ACS21066.1
PFAM: outer membrane efflux protein; KEGG: dac:Daci_2077 outer membrane efflux protein.
  
     0.722
Your Current Organism:
Variovorax paradoxus S110
NCBI taxonomy Id: 543728
Other names: V. paradoxus S110, Variovorax paradoxus str. S110, Variovorax paradoxus strain S110
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