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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS18342.1KEGG: aav:Aave_1942 transcriptional regulator-like protein; Belongs to the GbsR family. (201 aa)    
Predicted Functional Partners:
ACS18341.1
PFAM: putative thiol-disulphide oxidoreductase DCC; KEGG: aav:Aave_1941 putative thiol-disulphide oxidoreductase DCC.
       0.644
ACS18340.1
PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: mca:MCA0083 UbiE/COQ5 family methlytransferase.
       0.586
ACS18339.1
KEGG: aba:Acid345_1846 hypothetical protein.
       0.555
ACS18343.1
PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: pol:Bpro_3135 radical SAM.
       0.546
ACS18338.1
PFAM: Dopa 45-dioxygenase; KEGG: pol:Bpro_3138 hypothetical protein.
       0.475
Your Current Organism:
Variovorax paradoxus S110
NCBI taxonomy Id: 543728
Other names: V. paradoxus S110, Variovorax paradoxus str. S110, Variovorax paradoxus strain S110
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