STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS18375.1PFAM: SMP-30/Gluconolaconase/LRE domain protein; KEGG: pna:Pnap_1592 SMP-30/gluconolaconase/LRE domain-containing protein. (296 aa)    
Predicted Functional Partners:
ACS22287.1
PFAM: dihydroxy-acid and 6-phosphogluconate dehydratase; KEGG: mmw:Mmwyl1_0518 dihydroxy-acid dehydratase; Belongs to the IlvD/Edd family.
 
  
 0.917
ACS22300.1
PFAM: dihydroxy-acid and 6-phosphogluconate dehydratase; KEGG: dac:Daci_3912 dihydroxy-acid dehydratase; Belongs to the IlvD/Edd family.
 
  
 0.917
ACS17692.1
PFAM: short-chain dehydrogenase/reductase SDR; KEGG: aav:Aave_2258 short-chain dehydrogenase/reductase SDR.
 
 0.915
ACS21675.1
PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: rfr:Rfer_0433 short-chain dehydrogenase/reductase SDR.
 
 0.915
ACS18376.1
PFAM: NAD-dependent epimerase/dehydratase; Male sterility domain; 3-beta hydroxysteroid dehydrogenase/isomerase; short-chain dehydrogenase/reductase SDR; KEGG: pmy:Pmen_3299 NAD-dependent epimerase/dehydratase.
 
   
 0.859
ACS18374.1
TIGRFAM: TRAP dicarboxylate transporter, DctP subunit; PFAM: TRAP dicarboxylate transporter- DctP subunit; KEGG: aav:Aave_2592 TRAP dicarboxylate transporter, DctP subunit.
       0.614
ACS18377.1
PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; KEGG: aav:Aave_2589 GntR family transcriptional regulator.
     
 0.570
ACS18373.1
PFAM: Tripartite ATP-independent periplasmic transporter DctQ component; KEGG: aav:Aave_2593 tripartite ATP-independent periplasmic transporter DctQ.
 
     0.514
ACS18379.1
KEGG: aav:Aave_2587 5-dehydro-4-deoxyglucarate dehydratase; TIGRFAM: 5-dehydro-4-deoxyglucarate dehydratase; PFAM: dihydrodipicolinate synthetase; Belongs to the DapA family.
 
     0.511
ACS18378.1
PFAM: conserved hypothetical protein; KEGG: aav:Aave_2588 hypothetical protein.
       0.409
Your Current Organism:
Variovorax paradoxus S110
NCBI taxonomy Id: 543728
Other names: V. paradoxus S110, Variovorax paradoxus str. S110, Variovorax paradoxus strain S110
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