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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS18385.1PFAM: Substrate-binding region of ABC-type glycine betaine transport system; binding-protein-dependent transport systems inner membrane component; KEGG: rso:RSc2516 putative lipoprotein transmembrane. (509 aa)    
Predicted Functional Partners:
ACS19147.1
KEGG: aav:Aave_1497 glycine betaine/L-proline ABC transporter, ATPase subunit; TIGRFAM: glycine betaine/L-proline ABC transporter, ATPase subunit; PFAM: ABC transporter related; CBS domain containing protein; SMART: AAA ATPase.
 
  
 0.729
ACS19145.1
PFAM: Substrate-binding region of ABC-type glycine betaine transport system; KEGG: dac:Daci_2666 glycine betaine transporter periplasmic subunit.
  
 
 0.700
ACS21733.1
KEGG: mpt:Mpe_A3645 putative transmembrane protein.
 
    0.700
ACS19146.1
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: aav:Aave_1496 binding-protein-dependent transport systems inner membrane component.
 
  
0.654
ACS20276.1
TIGRFAM: methyltransferase; KEGG: mpt:Mpe_A1380 hypothetical protein.
 
     0.633
ACS17233.1
KEGG: pna:Pnap_2293 hypothetical protein.
  
    0.591
ACS18654.1
PFAM: Hemerythrin HHE cation binding domain protein; KEGG: pna:Pnap_1314 hemerythrin HHE cation binding domain-containing protein.
  
    0.591
ACS20231.1
KEGG: dia:Dtpsy_2105 hypothetical protein.
  
    0.591
ACS22319.1
KEGG: rme:Rmet_5324 putative signal peptide protein.
  
    0.591
msrB
KEGG: aav:Aave_2948 methionine-R-sulfoxide reductase; TIGRFAM: methionine-R-sulfoxide reductase; PFAM: Methionine sulfoxide reductase B; Belongs to the MsrB Met sulfoxide reductase family.
 
  
 0.583
Your Current Organism:
Variovorax paradoxus S110
NCBI taxonomy Id: 543728
Other names: V. paradoxus S110, Variovorax paradoxus str. S110, Variovorax paradoxus strain S110
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