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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS18397.1PFAM: Extracellular ligand-binding receptor; KEGG: rfr:Rfer_0288 extracellular ligand-binding receptor. (391 aa)    
Predicted Functional Partners:
ACS18399.1
PFAM: inner-membrane translocator; KEGG: pna:Pnap_2728 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.909
ACS18398.1
PFAM: inner-membrane translocator; KEGG: rfr:Rfer_0289 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.907
ACS18400.1
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pol:Bpro_3381 ABC transporter related.
 
  
 0.881
ACS18401.1
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pna:Pnap_2726 ABC transporter related.
 
  
 0.863
ACS20909.1
PFAM: inner-membrane translocator; KEGG: vei:Veis_1363 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.844
ACS20908.1
PFAM: inner-membrane translocator; KEGG: bcs:BCAN_B0649 hypothetical protein; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.787
ACS16846.1
PFAM: inner-membrane translocator; KEGG: pol:Bpro_4063 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.706
ACS20910.1
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rec:RHECIAT_CH0003686 probable branched-chain amino acid ABC transporter, ATP-binding protein.
 
  
 0.684
ACS18157.1
PFAM: ABC transporter related; inner-membrane translocator; SMART: AAA ATPase; KEGG: vei:Veis_2874 ABC transporter related; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.683
ACS16749.1
PFAM: inner-membrane translocator; KEGG: dac:Daci_0078 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.681
Your Current Organism:
Variovorax paradoxus S110
NCBI taxonomy Id: 543728
Other names: V. paradoxus S110, Variovorax paradoxus str. S110, Variovorax paradoxus strain S110
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