Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ACS18398.1PFAM: inner-membrane translocator; KEGG: rfr:Rfer_0289 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family. (290 aa)    
Predicted Functional Partners:
ACS18399.1
PFAM: inner-membrane translocator; KEGG: pna:Pnap_2728 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
 0.996
ACS18400.1
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pol:Bpro_3381 ABC transporter related.
 
  
 0.965
ACS18401.1
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pna:Pnap_2726 ABC transporter related.
 
  
 0.957
ACS18397.1
PFAM: Extracellular ligand-binding receptor; KEGG: rfr:Rfer_0288 extracellular ligand-binding receptor.
 
  
 0.902
ACS20909.1
PFAM: inner-membrane translocator; KEGG: vei:Veis_1363 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.864
ACS16748.1
PFAM: inner-membrane translocator; KEGG: dac:Daci_0079 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
  
 0.855
ACS17027.1
PFAM: inner-membrane translocator; KEGG: bpt:Bpet3756 branched chain amino acid ABC transporter permease; Belongs to the binding-protein-dependent transport system permease family.
  
 0.851
ACS18234.1
PFAM: inner-membrane translocator; KEGG: dac:Daci_6025 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
  
 0.851
ACS17296.1
PFAM: inner-membrane translocator; KEGG: azo:azo1126 putative branched-chain amino acid transport permease; Belongs to the binding-protein-dependent transport system permease family.
  
 0.850
ACS20910.1
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rec:RHECIAT_CH0003686 probable branched-chain amino acid ABC transporter, ATP-binding protein.
 
  
 0.831
Your Current Organism:
Variovorax paradoxus S110
NCBI taxonomy Id: 543728
Other names: V. paradoxus S110, Variovorax paradoxus str. S110, Variovorax paradoxus strain S110
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