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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS18419.1PFAM: thioesterase superfamily protein; KEGG: vei:Veis_2066 thioesterase superfamily protein. (147 aa)    
Predicted Functional Partners:
ACS20361.1
PFAM: KR domain protein; Beta-ketoacyl synthase; Acyl transferase; short-chain dehydrogenase/reductase SDR; phosphopantetheine-binding; KEGG: aav:Aave_3732 beta-ketoacyl synthase.
  
 
 0.878
ACS18418.1
PFAM: histone deacetylase superfamily; KEGG: pol:Bpro_3087 histone deacetylase superfamily.
       0.813
ACS18417.1
Hypothetical protein.
       0.714
ACS18416.1
TIGRFAM: phasin family protein; KEGG: dia:Dtpsy_1366 phasin family protein.
       0.580
ACS19802.1
TIGRFAM: amino acid adenylation domain protein; PFAM: AMP-dependent synthetase and ligase; Beta-ketoacyl synthase; aminotransferase class-III; Acyl transferase; phosphopantetheine-binding; KEGG: bph:Bphy_1672 amino acid adenylation domain-containing protein.
  
 
 0.530
ACS18041.1
TIGRFAM: malonyl CoA-acyl carrier protein transacylase; PFAM: Acyl transferase; KEGG: ajs:Ajs_3279 [acyl-carrier-protein] S-malonyltransferase.
  
 
 0.503
ACS21970.1
KEGG: dac:Daci_1762 (acyl-carrier protein) S-malonyltransferase.
  
 
 0.503
ACS18415.1
PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: ajs:Ajs_1606 short-chain dehydrogenase/reductase SDR; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
   
 
 0.435
Your Current Organism:
Variovorax paradoxus S110
NCBI taxonomy Id: 543728
Other names: V. paradoxus S110, Variovorax paradoxus str. S110, Variovorax paradoxus strain S110
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