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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS18426.1PFAM: major facilitator superfamily MFS_1; KEGG: pol:Bpro_3076 major facilitator superfamily MFS_1. (387 aa)    
Predicted Functional Partners:
ACS18425.1
PFAM: protein of unknown function DUF195; KEGG: rfr:Rfer_2166 hypothetical protein.
       0.850
ACS19715.1
KEGG: vei:Veis_3631 hypothetical protein.
  
     0.753
ACS18423.1
KEGG: pol:Bpro_3079 putative transmembrane protein.
     
 0.738
ACS18424.1
PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; KEGG: pna:Pnap_1622 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding.
       0.729
ACS20740.1
KEGG: aav:Aave_3642 hypothetical protein.
  
     0.719
ACS21798.1
PFAM: regulatory protein MarR; KEGG: dia:Dtpsy_3350 transcriptional regulator, MarR family.
 
   
 0.666
ACS20369.1
KEGG: aav:Aave_3997 hypothetical protein.
  
     0.660
ACS20135.1
PFAM: heat shock protein Hsp20; KEGG: pol:Bpro_3264 heat shock protein HSP20; Belongs to the small heat shock protein (HSP20) family.
  
   
 0.649
ACS21295.1
TIGRFAM: HAD-superfamily hydrolase, subfamily IIB; PFAM: Haloacid dehalogenase domain protein hydrolase type 3; KEGG: pol:Bpro_4133 HAD-superfamily hydrolase subfamily IIB.
 
    0.641
ACS21082.1
PFAM: protein of unknown function DUF490; KEGG: aav:Aave_3956 hypothetical protein.
 
     0.631
Your Current Organism:
Variovorax paradoxus S110
NCBI taxonomy Id: 543728
Other names: V. paradoxus S110, Variovorax paradoxus str. S110, Variovorax paradoxus strain S110
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