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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS18430.1KEGG: pna:Pnap_1626 hypothetical protein. (387 aa)    
Predicted Functional Partners:
efp
Translation elongation factor P; Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase.
 
 
 
 0.984
ACS19360.1
PFAM: Orn/Lys/Arg decarboxylase major region; Orn/Lys/Arg decarboxylase domain protein; KEGG: pol:Bpro_2415 ornithine decarboxylase.
  
     0.676
ACS18319.1
KEGG: pna:Pnap_2770 membrane protein-like protein.
  
     0.625
ACS17801.1
KEGG: aav:Aave_1006 hypothetical protein.
  
     0.599
ACS18431.1
PFAM: peptidase M20; peptidase dimerisation domain protein; KEGG: rme:Rmet_3665 hypothetical protein.
  
    0.581
ACS18946.1
KEGG: rfr:Rfer_2901 putative inner membrane transmembrane protein.
  
     0.531
ACS18416.1
TIGRFAM: phasin family protein; KEGG: dia:Dtpsy_1366 phasin family protein.
  
     0.529
ACS22510.1
Hypothetical protein; KEGG: ajs:Ajs_2561 translation initiation factor 2.
  
     0.516
cyaY
Iron donor protein CyaY; Involved in iron-sulfur (Fe-S) cluster assembly. May act as a regulator of Fe-S biogenesis.
  
     0.512
ACS17526.1
PFAM: RNA-binding S4 domain protein; SMART: RNA-binding S4 domain protein; KEGG: pol:Bpro_1128 RNA-binding S4.
 
     0.510
Your Current Organism:
Variovorax paradoxus S110
NCBI taxonomy Id: 543728
Other names: V. paradoxus S110, Variovorax paradoxus str. S110, Variovorax paradoxus strain S110
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