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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS18442.1KEGG: pol:Bpro_4530 hypothetical protein. (110 aa)    
Predicted Functional Partners:
ACS18443.1
PFAM: Transglycosylase-associated protein; KEGG: bpy:Bphyt_4202 transglycosylase-associated protein.
       0.719
ACS20198.1
KEGG: bxe:Bxe_B0345 hypothetical protein.
  
     0.608
ACS18792.1
PFAM: glutaredoxin; KEGG: aav:Aave_2457 glutaredoxin.
  
     0.452
ACS18444.1
PFAM: PEBP family protein; KEGG: mrd:Mrad2831_0133 PEBP family protein.
       0.449
ACS19359.1
KEGG: rfr:Rfer_2125 hypothetical protein.
  
     0.439
ACS21146.1
PFAM: protein of unknown function DUF159; KEGG: rfr:Rfer_3054 hypothetical protein.
  
     0.401
Your Current Organism:
Variovorax paradoxus S110
NCBI taxonomy Id: 543728
Other names: V. paradoxus S110, Variovorax paradoxus str. S110, Variovorax paradoxus strain S110
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