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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS18459.1PFAM: 2OG-Fe(II) oxygenase; SMART: Prolyl 4-hydroxylase alpha subunit; KEGG: lch:Lcho_1570 2OG-Fe(II) oxygenase. (228 aa)    
Predicted Functional Partners:
ACS18458.1
TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: pol:Bpro_3047 TonB-dependent siderophore receptor.
 
  
 0.970
ACS20594.1
TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: dac:Daci_2953 TonB-dependent siderophore receptor.
 
  
 0.738
ACS18461.1
PFAM: cytochrome B561; KEGG: ajs:Ajs_0510 cytochrome b561.
       0.700
ACS18706.1
TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: mpt:Mpe_A0688 TonB-dependent receptor protein.
 
  
 0.697
ACS17097.1
TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: dia:Dtpsy_2068 TonB-dependent siderophore receptor.
 
  
 0.685
ACS18460.1
Hypothetical protein; KEGG: dia:Dtpsy_0527 putative signal peptide protein.
       0.685
ACS17771.1
TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: aav:Aave_0192 TonB-dependent siderophore receptor.
 
  
 0.657
ACS18709.1
TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: dac:Daci_4462 TonB-dependent siderophore receptor.
 
  
 0.655
ACS18753.1
TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: mms:mma_0066 TonB-dependent receptor.
 
  
 0.638
ACS20357.1
TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor plug; TonB-dependent receptor; KEGG: aav:Aave_3728 TonB-dependent siderophore receptor.
 
  
 0.624
Your Current Organism:
Variovorax paradoxus S110
NCBI taxonomy Id: 543728
Other names: V. paradoxus S110, Variovorax paradoxus str. S110, Variovorax paradoxus strain S110
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