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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS18495.1KEGG: dac:Daci_1239 hypothetical protein. (158 aa)    
Predicted Functional Partners:
ACS18497.1
PFAM: phosphopantetheine-binding; KEGG: dar:Daro_1173 phosphopantetheine-binding.
 
     0.752
ACS18496.1
PFAM: Beta-ketoacyl synthase; KEGG: dar:Daro_1172 beta-ketoacyl synthase; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
       0.714
ACS17975.1
KEGG: ypi:YpsIP31758_4012 hypothetical protein.
  
     0.612
ACS18494.1
PFAM: sulphate transporter; Sulfate transporter/antisigma-factor antagonist STAS; KEGG: vei:Veis_3287 sulphate transporter.
       0.548
ACS18498.1
KEGG: pol:Bpro_3303 phosphoesterase, PA-phosphatase related.
       0.499
flhD
Flagellar transcriptional activator; Functions in complex with FlhC as a master transcriptional regulator that regulates transcription of several flagellar and non- flagellar operons by binding to their promoter region. Activates expression of class 2 flagellar genes, including fliA, which is a flagellum-specific sigma factor that turns on the class 3 genes. Also regulates genes whose products function in a variety of physiological pathways; Belongs to the FlhD family.
  
     0.477
ACS20719.1
PFAM: AsmA family protein; KEGG: pol:Bpro_0883 AsmA.
  
     0.468
ACS17776.1
PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: bbr:BB0832 TonB-dependent receptor.
  
     0.464
ACS16722.1
KEGG: mms:mma_0343 hypothetical protein.
  
     0.444
ACS19145.1
PFAM: Substrate-binding region of ABC-type glycine betaine transport system; KEGG: dac:Daci_2666 glycine betaine transporter periplasmic subunit.
  
     0.434
Your Current Organism:
Variovorax paradoxus S110
NCBI taxonomy Id: 543728
Other names: V. paradoxus S110, Variovorax paradoxus str. S110, Variovorax paradoxus strain S110
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