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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS18500.1PFAM: major facilitator superfamily MFS_1; KEGG: pna:Pnap_2216 major facilitator superfamily transporter. (417 aa)    
Predicted Functional Partners:
ACS18501.1
KEGG: pen:PSEEN2125 hypothetical protein.
 
   
 0.747
ACS18499.1
Transcriptional regulator, AraC family; PFAM: AraC protein arabinose-binding/dimerisation; helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: mpt:Mpe_A1555 AraC family transcriptional regulator.
 
     0.638
ACS19382.1
KEGG: pna:Pnap_2002 hypothetical protein.
  
     0.544
ACS21719.1
KEGG: pol:Bpro_4643 protein of unknown function DUF1631.
  
   
 0.488
ACS17558.1
KEGG: pol:Bpro_1065 hypothetical protein.
  
     0.458
ACS18498.1
KEGG: pol:Bpro_3303 phosphoesterase, PA-phosphatase related.
       0.401
Your Current Organism:
Variovorax paradoxus S110
NCBI taxonomy Id: 543728
Other names: V. paradoxus S110, Variovorax paradoxus str. S110, Variovorax paradoxus strain S110
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