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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS18535.1PFAM: cysteine dioxygenase type I; KEGG: cti:RALTA_B1908 hypothetical protein. (212 aa)    
Predicted Functional Partners:
ACS20588.1
SMART: Rhodanese domain protein; KEGG: vei:Veis_4136 rhodanese domain-containing protein.
  
 0.865
ACS18537.1
TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: dac:Daci_5771 polar amino acid ABC transporter, inner membrane subunit.
 
     0.791
ACS18534.1
KEGG: dac:Daci_5774 cystathionine beta-lyase; TIGRFAM: cystathionine beta-lyase; PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein.
       0.780
ACS20490.1
PFAM: Rhodanese domain protein; SMART: Rhodanese domain protein; KEGG: reu:Reut_B5044 rhodanese-like protein.
  
 0.762
ACS18536.1
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: dac:Daci_5772 ABC transporter related.
 
     0.748
ACS20236.1
PFAM: Succinylglutamate desuccinylase/aspartoacylase; KEGG: bav:BAV2950 hypothetical protein.
  
     0.580
ACS18533.1
TIGRFAM: TRAP dicarboxylate transporter, DctP subunit; PFAM: TRAP dicarboxylate transporter- DctP subunit; KEGG: aav:Aave_1409 TRAP dicarboxylate transporter-DctP subunit.
       0.499
ACS22631.1
Transcriptional regulator, AraC family; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: dsh:Dshi_3708 AraC family transcriptional regulator.
  
     0.462
ACS20489.1
PFAM: cysteine dioxygenase type I; KEGG: rme:Rmet_2216 cysteine dioxygenase type I.
  
     0.445
ACS22523.1
KEGG: bav:BAV2615 poly(aspartic acid) hydrolase.
  
     0.440
Your Current Organism:
Variovorax paradoxus S110
NCBI taxonomy Id: 543728
Other names: V. paradoxus S110, Variovorax paradoxus str. S110, Variovorax paradoxus strain S110
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