Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ACS18549.1PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: scl:sce4768 ABC-type transporter, ATP-binding protein. (269 aa)    
Predicted Functional Partners:
ACS18548.1
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bbt:BBta_1369 ABC transporter membrane protein.
 
 
 0.970
ACS18550.1
PFAM: NMT1/THI5 like domain protein; KEGG: scl:sce4103 ABC transporter, periplasmic substrate-binding protein.
 
 
 0.918
ACS22111.1
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bbr:BB2457 permease component of ABC transporter.
 
 
 0.865
ACS16765.1
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: vei:Veis_0386 binding-protein-dependent transport systems inner membrane component.
 
 
 0.859
ACS16766.1
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: vei:Veis_0385 binding-protein-dependent transport systems inner membrane component.
 
 
 0.851
ACS18559.1
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bur:Bcep18194_B2062 nitrate/sulfonate/bicarbonate ABC transporter inner membrane protein.
 
 
 0.848
ACS18558.1
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bxe:Bxe_A2158 sulfate ester ABC transporter inner membrane protein.
 
 
 0.846
ACS16818.1
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pol:Bpro_1046 binding-protein-dependent transport systems inner membrane component.
 
 
 0.840
ACS20458.1
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: vei:Veis_4284 binding-protein-dependent transport systems inner membrane component.
 
 
 0.835
ACS16930.1
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: vei:Veis_0834 binding-protein-dependent transport systems inner membrane component.
 
 
 0.834
Your Current Organism:
Variovorax paradoxus S110
NCBI taxonomy Id: 543728
Other names: V. paradoxus S110, Variovorax paradoxus str. S110, Variovorax paradoxus strain S110
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