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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS18567.1PFAM: Spore coat U domain protein; KEGG: ara:Arad_7724 hypothetical protein. (342 aa)    
Predicted Functional Partners:
ACS18569.1
KEGG: pcr:Pcryo_1830 P pilus assembly protein chaperone PapD-like.
 
 
 0.976
ACS18568.1
PFAM: fimbrial biogenesis outer membrane usher protein; KEGG: pcr:Pcryo_1831 fimbrial biogenesis outer membrane usher protein.
 
  
 0.962
ACS18570.1
PFAM: Spore coat U domain protein; Fimbrial protein; KEGG: pcr:Pcryo_1832 hypothetical protein.
 
    
0.674
ACS18566.1
Hypothetical protein.
       0.491
ACS16912.1
KEGG: xoo:XOO1635 hypothetical protein.
  
     0.419
ACS19142.1
KEGG: bur:Bcep18194_B0491 hypothetical protein.
  
     0.410
Your Current Organism:
Variovorax paradoxus S110
NCBI taxonomy Id: 543728
Other names: V. paradoxus S110, Variovorax paradoxus str. S110, Variovorax paradoxus strain S110
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