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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS18572.1PFAM: polysaccharide export protein; KEGG: bac:BamMC406_1118 polysaccharide export protein. (372 aa)    
Predicted Functional Partners:
ACS17842.1
KEGG: pna:Pnap_3194 exopolysaccharide transport protein family; TIGRFAM: exopolysaccharide transport protein family; capsular exopolysaccharide family; PFAM: lipopolysaccharide biosynthesis protein.
 
 
 0.985
ACS18587.1
KEGG: pna:Pnap_3194 exopolysaccharide transport protein family; TIGRFAM: exopolysaccharide transport protein family; capsular exopolysaccharide family; PFAM: lipopolysaccharide biosynthesis protein.
 
 
 0.985
ACS19808.1
KEGG: pna:Pnap_3194 exopolysaccharide transport protein family; TIGRFAM: exopolysaccharide transport protein family; capsular exopolysaccharide family; PFAM: lipopolysaccharide biosynthesis protein.
 
 
 0.985
ACS19807.1
PFAM: polysaccharide export protein; KEGG: pna:Pnap_3196 polysaccharide export protein.
  
  
 
0.902
ACS17840.1
PFAM: polysaccharide export protein; KEGG: bam:Bamb_6483 polysaccharide export protein.
  
  
 
0.901
ACS18581.1
PFAM: sugar transferase; KEGG: ajs:Ajs_3034 undecaprenyl-phosphate galactose phosphotransferase.
 
  
 0.839
ACS17417.1
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: smt:Smal_0491 ABC transporter related.
  
  
 0.832
ACS17418.1
PFAM: ABC-2 type transporter; KEGG: dno:DNO_0335 ABC-2 type transporter family protein.
  
  
 0.814
ACS18586.1
PFAM: polysaccharide biosynthesis protein CapD; Male sterility domain; short-chain dehydrogenase/reductase SDR; NAD-dependent epimerase/dehydratase; KEGG: rfr:Rfer_2679 polysaccharide biosynthesis protein CapD.
 
  
 0.799
ACS19818.1
KEGG: pna:Pnap_3192 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; TIGRFAM: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; PFAM: mannose-6-phosphate isomerase type II; Nucleotidyl transferase; Cupin 2 conserved barrel domain protein.
 
  
 0.672
Your Current Organism:
Variovorax paradoxus S110
NCBI taxonomy Id: 543728
Other names: V. paradoxus S110, Variovorax paradoxus str. S110, Variovorax paradoxus strain S110
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