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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS18580.1PFAM: glycosyl transferase family 2; KEGG: sfv:SFV_2092 dTDP-rhamnosyl transferase. (299 aa)    
Predicted Functional Partners:
ACS18581.1
PFAM: sugar transferase; KEGG: ajs:Ajs_3034 undecaprenyl-phosphate galactose phosphotransferase.
  
  
 0.858
ACS18584.1
Glutamine--scyllo-inositol transaminase; PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: tmz:Tmz1t_1130 DegT/DnrJ/EryC1/StrS aminotransferase; Belongs to the DegT/DnrJ/EryC1 family.
  
  
 0.813
ACS17421.1
PFAM: glycosyl transferase family 2; KEGG: sml:Smlt3682 putative glycosyl transferase.
  
     0.770
ACS17408.1
dTDP-4-dehydrorhamnose 3,5-epimerase; Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4-hexulose. Belongs to the dTDP-4-dehydrorhamnose 3,5-epimerase family.
 
  
 0.754
ACS18421.1
PFAM: CsbD family protein; KEGG: efe:EFER_4136 putative stress response protein; Belongs to the UPF0337 (CsbD) family.
   
    0.753
ACS18583.1
TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: vpa:VP0233 hypothetical protein.
 
   
 0.749
ACS18582.1
PFAM: protein of unknown function DUF201; KEGG: vpa:VP0232 putative carbamoyl phosphate synthase large subunit.
       0.722
ACS18586.1
PFAM: polysaccharide biosynthesis protein CapD; Male sterility domain; short-chain dehydrogenase/reductase SDR; NAD-dependent epimerase/dehydratase; KEGG: rfr:Rfer_2679 polysaccharide biosynthesis protein CapD.
  
  
 0.708
ACS17406.1
dTDP-4-dehydrorhamnose reductase; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose; Belongs to the dTDP-4-dehydrorhamnose reductase family.
 
  
 0.707
ACS17407.1
Glucose-1-phosphate thymidylyltransferase; Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis. Belongs to the glucose-1-phosphate thymidylyltransferase family.
 
  
 0.706
Your Current Organism:
Variovorax paradoxus S110
NCBI taxonomy Id: 543728
Other names: V. paradoxus S110, Variovorax paradoxus str. S110, Variovorax paradoxus strain S110
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