close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS18605.1PFAM: NUDIX hydrolase; KEGG: cti:RALTA_B1427 putative hydrolase; NUDIX (NUcleoside DIphosphate) hydrolase motif; metallo-hydrolase/oxidoreductase. (426 aa)    
Predicted Functional Partners:
ACS18607.1
KEGG: bpt:Bpet1022 arsenate reductase; TIGRFAM: arsenate reductase; PFAM: arsenate reductase and related.
  
  
 0.543
ACS18606.1
TIGRFAM: arsenical resistance protein ArsH; PFAM: NADPH-dependent FMN reductase; KEGG: bpt:Bpet4549 putative NADPH-dependent FMN reductase.
       0.538
ACS20649.1
PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: bav:BAV2072 ferredoxin reductase.
 
 
 0.520
ACS20901.1
PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: bpe:BP0585 putative ferredoxin reductase.
 
 
 0.511
ACS21572.1
KEGG: rfr:Rfer_0575 hypothetical protein.
  
 
 
 0.479
ACS18608.1
SMART: regulatory protein ArsR; KEGG: ajs:Ajs_3055 ArsR family transcriptional regulator.
     
 0.445
ACS22789.1
KEGG: bur:Bcep18194_B0960 carboxymuconolactone decarboxylase.
  
     0.432
ACS16967.1
PFAM: BFD domain protein [2Fe-2S]-binding domain protein; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: rfr:Rfer_0885 BFD-like (2Fe-2S)-binding protein.
   
 0.416
ACS21819.1
PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; BFD domain protein [2Fe-2S]-binding domain protein; HI0933 family protein; KEGG: hypothetical protein.
   
 0.416
ACS18609.1
TIGRFAM: arsenical-resistance protein; PFAM: Bile acid:sodium symporter; KEGG: reh:H16_A2176 arsenite efflux pump ACR3.
       0.406
Your Current Organism:
Variovorax paradoxus S110
NCBI taxonomy Id: 543728
Other names: V. paradoxus S110, Variovorax paradoxus str. S110, Variovorax paradoxus strain S110
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.