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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS18612.1PFAM: type II secretion system protein E; General secretory system II protein E domain protein; KEGG: mpt:Mpe_A2969 type II secretory pathway ATPase PulE/Tfp pilus assembly pathway ATPase PilB. (642 aa)    
Predicted Functional Partners:
ACS17722.1
TIGRFAM: general secretion pathway protein F; PFAM: type II secretion system protein; KEGG: dia:Dtpsy_0642 general secretion pathway protein F.
 
 
 0.960
ACS20834.1
PFAM: type II secretion system protein; KEGG: ajs:Ajs_0804 type II secretion system protein.
 
 
 0.960
ACS20835.1
Prepilin peptidase; Cleaves type-4 fimbrial leader sequence and methylates the N- terminal (generally Phe) residue.
 
 
 0.889
ACS17732.1
TIGRFAM: general secretion pathway protein G; PFAM: type II secretion system protein G; KEGG: aav:Aave_0925 general secretion pathway protein G.
 
 
 0.874
ACS17727.1
PFAM: General secretion pathway L; KEGG: pol:Bpro_1326 hypothetical protein.
  
 
 0.816
ACS17791.1
TIGRFAM: type IV pilus assembly protein PilM; KEGG: pol:Bpro_0781 type IV pilus assembly protein PilM.
 
 
 0.804
ACS17104.1
PFAM: Fimbrial protein pilin; KEGG: abb:ABBFA_000333 fimbrial protein precursor (pilin) (Strain P1); Belongs to the N-Me-Phe pilin family.
 
 
 0.760
ACS19075.1
PFAM: Fimbrial protein pilin; KEGG: rme:Rmet_0472 fimbrial protein pilin; Belongs to the N-Me-Phe pilin family.
 
 
 0.722
ACS17795.1
TIGRFAM: type IV pilus secretin PilQ; PFAM: type II and III secretion system protein; Secretin/TonB short domain; NolW domain protein; KEGG: rfr:Rfer_2923 type II and III secretion system protein.
 
 
 
 0.705
ACS17792.1
PFAM: Fimbrial assembly family protein; KEGG: pol:Bpro_0782 fimbrial assembly.
  
 
 0.692
Your Current Organism:
Variovorax paradoxus S110
NCBI taxonomy Id: 543728
Other names: V. paradoxus S110, Variovorax paradoxus str. S110, Variovorax paradoxus strain S110
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