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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS18617.1KEGG: har:HEAR2529 hypothetical protein. (221 aa)    
Predicted Functional Partners:
ACS18616.1
PFAM: Erythromycin esterase; KEGG: met:M446_2872 erythromycin esterase.
     0.992
ACS17343.1
PFAM: dienelactone hydrolase; KEGG: mno:Mnod_2323 dienelactone hydrolase.
     0.979
ACS18620.1
PFAM: heat shock protein Hsp20; KEGG: lch:Lcho_3375 heat shock protein HSP20; Belongs to the small heat shock protein (HSP20) family.
 
  
 0.682
ACS18619.1
PFAM: heat shock protein Hsp20; KEGG: lch:Lcho_3376 heat shock protein HSP20; Belongs to the small heat shock protein (HSP20) family.
 
  
 0.675
ACS18618.1
Hypothetical protein.
       0.483
ACS17638.1
Trehalose-phosphatase; Removes the phosphate from trehalose 6-phosphate to produce free trehalose.
  
    0.424
ACS18444.1
PFAM: PEBP family protein; KEGG: mrd:Mrad2831_0133 PEBP family protein.
 
     0.411
Your Current Organism:
Variovorax paradoxus S110
NCBI taxonomy Id: 543728
Other names: V. paradoxus S110, Variovorax paradoxus str. S110, Variovorax paradoxus strain S110
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