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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS18643.1KEGG: aav:Aave_0313 hypothetical protein. (143 aa)    
Predicted Functional Partners:
ACS18421.1
PFAM: CsbD family protein; KEGG: efe:EFER_4136 putative stress response protein; Belongs to the UPF0337 (CsbD) family.
  
  
 0.815
ACS21552.1
PFAM: Peptidoglycan-binding LysM; transport-associated; SMART: Peptidoglycan-binding LysM; KEGG: hypothetical protein.
  
  
 0.743
ACS17712.1
PFAM: Domain of unknown function DUF1854; KEGG: pna:Pnap_1008 hypothetical protein.
  
     0.720
ACS17711.1
PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase; KEGG: pna:Pnap_1007 ABC transporter related.
  
     0.685
ACS17032.1
PFAM: deoxyribose-phosphate aldolase/phospho-2-dehydro-3-deoxyheptonate aldolase; KEGG: oan:Oant_3078 deoxyribose-phosphate aldolase/phospho-2-dehydro-3-deoxyheptonate aldolase.
   
    0.683
ACS19987.1
PFAM: acyltransferase 3; KEGG: ajs:Ajs_2806 acyltransferase 3.
  
     0.676
ACS18642.1
Hypothetical protein.
       0.648
ACS16706.1
PFAM: protein of unknown function DUF1328; KEGG: pol:Bpro_0066 protein of unknown function DUF1328.
  
  
 0.633
ACS19716.1
PFAM: protein of unknown function DUF748; KEGG: pol:Bpro_2872 protein of unknown function DUF748.
  
  
 0.633
ACS20723.1
PFAM: protein of unknown function DUF1328; KEGG: mpt:Mpe_A2904 hypothetical protein.
  
  
 0.633
Your Current Organism:
Variovorax paradoxus S110
NCBI taxonomy Id: 543728
Other names: V. paradoxus S110, Variovorax paradoxus str. S110, Variovorax paradoxus strain S110
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