STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS18646.1KEGG: nha:Nham_3948 hypothetical protein. (104 aa)    
Predicted Functional Partners:
ACS18647.1
Putative signal transduction protein with CBS domains; PFAM: CBS domain containing protein; SMART: CBS domain containing protein; KEGG: dia:Dtpsy_1821 CBS domain containing protein.
       0.709
ACS22211.1
KEGG: mpt:Mpe_A1667 hypothetical protein.
  
 
 0.694
ACS22498.1
KEGG: xcv:XCV1188 hypothetical protein.
  
 
 0.694
ACS22104.1
KEGG: vei:Veis_2291 CopG/Arc/MetJ family transcriptional regulator.
  
 
 0.655
ACS22839.1
Hypothetical protein; KEGG: dac:Daci_5158 CopG/Arc/MetJ family addiction module antidote protein.
  
 
 0.655
ACS22419.1
TIGRFAM: addiction module antitoxin, RelB/DinJ family; PFAM: RelB antitoxin; KEGG: pde:Pden_3591 addiction module antitoxin, RelB/DinJ family.
   
   0.595
ACS18645.1
PFAM: thiamine pyrophosphate protein TPP binding domain protein; thiamine pyrophosphate protein central region; thiamine pyrophosphate protein domain protein TPP-binding; KEGG: bpt:Bpet2376 pyruvate decarboxylase; Belongs to the TPP enzyme family.
 
     0.561
Your Current Organism:
Variovorax paradoxus S110
NCBI taxonomy Id: 543728
Other names: V. paradoxus S110, Variovorax paradoxus str. S110, Variovorax paradoxus strain S110
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.