STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS18648.1PFAM: isochorismatase hydrolase; KEGG: scl:sce2665 isochorismatase. (202 aa)    
Predicted Functional Partners:
ACS21455.1
PFAM: isochorismatase hydrolase; KEGG: mpo:Mpop_4344 isochorismatase hydrolase.
  
   
 0.764
ACS17300.1
PFAM: isochorismatase hydrolase; KEGG: azo:azo1121 isochorismatase family protein.
  
     0.763
ACS16938.1
PFAM: isochorismatase hydrolase; KEGG: bxe:Bxe_B1373 isochorismatase family protein.
  
     0.748
ACS17457.1
PFAM: isochorismatase hydrolase; KEGG: vei:Veis_1914 isochorismatase hydrolase.
  
     0.721
ACS21986.1
PFAM: isochorismatase hydrolase; KEGG: swi:Swit_1876 isochorismatase hydrolase.
  
     0.706
rutB
Isochorismatase hydrolase; In vivo, quickly hydrolyzes the ureidoacrylate peracid to avoid toxicity, but can also hydrolyzes ureidoacrylate that is formed spontaneously from ureidoacrylate peracid. One of the products of hydrolysis, carbamate, hydrolyzes spontaneously, thereby releasing one of the pyrimidine rings nitrogen atoms as ammonia and one of its carbons as CO2; Belongs to the isochorismatase family. RutB subfamily.
  
     0.671
ACS20906.1
PFAM: isochorismatase hydrolase; KEGG: bpe:BP1958 putative isochorismatase.
  
     0.656
ACS18649.1
Hypothetical protein.
       0.516
ACS18655.1
Catalase; Serves to protect cells from the toxic effects of hydrogen peroxide.
  
 
 0.477
ACS17164.1
Catalase; Serves to protect cells from the toxic effects of hydrogen peroxide.
  
 
 0.411
Your Current Organism:
Variovorax paradoxus S110
NCBI taxonomy Id: 543728
Other names: V. paradoxus S110, Variovorax paradoxus str. S110, Variovorax paradoxus strain S110
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