Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ACS18654.1PFAM: Hemerythrin HHE cation binding domain protein; KEGG: pna:Pnap_1314 hemerythrin HHE cation binding domain-containing protein. (202 aa)    
Predicted Functional Partners:
ACS18655.1
Catalase; Serves to protect cells from the toxic effects of hydrogen peroxide.
  
  
 0.738
ACS18653.1
PFAM: Hemerythrin HHE cation binding domain protein; KEGG: aav:Aave_3879 hemerythrin HHE cation binding domain-containing protein.
 
    
0.615
ACS18385.1
PFAM: Substrate-binding region of ABC-type glycine betaine transport system; binding-protein-dependent transport systems inner membrane component; KEGG: rso:RSc2516 putative lipoprotein transmembrane.
  
  
 0.613
ACS17164.1
Catalase; Serves to protect cells from the toxic effects of hydrogen peroxide.
  
  
 0.565
ACS18652.1
KEGG: pna:Pnap_2975 hypothetical protein.
 
    0.539
ACS18462.1
Bacterioferritin; Iron-storage protein.
   
  
 0.501
ACS20727.1
PFAM: Ferritin Dps family protein; Rubrerythrin; KEGG: aav:Aave_3866 ferritin, Dps family protein.
   
  
 0.501
ACS18616.1
PFAM: Erythromycin esterase; KEGG: met:M446_2872 erythromycin esterase.
  
     0.455
ACS18421.1
PFAM: CsbD family protein; KEGG: efe:EFER_4136 putative stress response protein; Belongs to the UPF0337 (CsbD) family.
  
  
 0.438
ACS22515.1
TIGRFAM: conserved repeat domain protein; PFAM: protein of unknown function DUF11; KEGG: pna:Pnap_0406 hypothetical protein.
  
     0.408
Your Current Organism:
Variovorax paradoxus S110
NCBI taxonomy Id: 543728
Other names: V. paradoxus S110, Variovorax paradoxus str. S110, Variovorax paradoxus strain S110
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