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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS18656.1PFAM: FAD dependent oxidoreductase; KEGG: cti:RALTA_A1621 gamma-Glu-putrescine oxidase, FAD/NAD(P)-binding. (437 aa)    
Predicted Functional Partners:
ACS18657.1
PFAM: homospermidine synthase; KEGG: nmu:Nmul_A1700 homospermidine synthase.
       0.781
ACS18658.1
Hypothetical protein.
       0.773
ACS18229.1
Beta-alanine--pyruvate transaminase; PFAM: aminotransferase class-III; KEGG: pol:Bpro_4286 beta alanine--pyruvate transaminase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
 
  
 0.714
ACS21832.1
PFAM: aminotransferase class-III; KEGG: pol:Bpro_0421 aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
 
  
 0.663
ACS22221.1
PFAM: aminotransferase class-III; KEGG: aav:Aave_2181 hypothetical protein; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
 
  
 0.652
ACS21393.1
PFAM: aminotransferase class-III; KEGG: mpt:Mpe_A1898 beta alanine--pyruvate transaminase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
 
  
 0.633
ACS19917.1
TIGRFAM: glycine cleavage system T protein; PFAM: glycine cleavage T protein (aminomethyl transferase); Glycine cleavage T-protein barrel; KEGG: dia:Dtpsy_1741 glycine cleavage system T protein.
  
 
 0.631
ACS21303.1
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pol:Bpro_2915 binding-protein-dependent transport systems inner membrane component.
 
    0.599
ACS21810.1
PFAM: peptidase C26; glutamine amidotransferase class-I; KEGG: aav:Aave_4597 peptidase C26.
 
  
 0.597
ACS18659.1
PFAM: phospholipase D/Transphosphatidylase; SMART: phospholipase D/Transphosphatidylase; KEGG: rpi:Rpic_4172 phospholipase D/transphosphatidylase.
       0.554
Your Current Organism:
Variovorax paradoxus S110
NCBI taxonomy Id: 543728
Other names: V. paradoxus S110, Variovorax paradoxus str. S110, Variovorax paradoxus strain S110
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